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PGSC0003DMT400035317 PGSC0003DMT400035317 PGSC0003DMT400008560 PGSC0003DMT400008560 PGSC0003DMT400074279 PGSC0003DMT400074279 PGSC0003DMT400083903 PGSC0003DMT400083903 PGSC0003DMT400017199 PGSC0003DMT400017199 PGSC0003DMT400073482 PGSC0003DMT400073482 ure ure PGSC0003DMT400017488 PGSC0003DMT400017488
"PGSC0003DMT400017199" - CXE carboxylesterase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400017199CXE carboxylesterase (332 aa)    
Predicted Functional Partners:
PGSC0003DMT400035317
Prefoldin subunit (129 aa)
       
      0.583
PGSC0003DMT400008560
F-box protein GID2 (207 aa)
       
 
  0.549
ure
Urease (527 aa)
           
  0.515
PGSC0003DMT400083903
Acyl-protein thioesterase (255 aa)
       
 
  0.424
PGSC0003DMT400073482
Acyl-protein thioesterase (256 aa)
       
 
  0.424
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
           
  0.408
PGSC0003DMT400074279
Prolyl endopeptidase (731 aa)
           
  0.406
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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