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PGSC0003DMT400065320 PGSC0003DMT400065320 PGSC0003DMT400065314 PGSC0003DMT400065314 PGSC0003DMT400065388 PGSC0003DMT400065388 PGSC0003DMT400071679 PGSC0003DMT400071679 PGSC0003DMT400060032 PGSC0003DMT400060032 PGSC0003DMT400017313 PGSC0003DMT400017313 PGSC0003DMT400017488 PGSC0003DMT400017488 PGSC0003DMT400056917 PGSC0003DMT400056917 PGSC0003DMT400003579 PGSC0003DMT400003579 PGSC0003DMT400021038 PGSC0003DMT400021038 PGSC0003DMT400046614 PGSC0003DMT400046614
"PGSC0003DMT400017313" - ATP-dependent helicase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
PGSC0003DMT400017313ATP-dependent helicase (1205 aa)    
Predicted Functional Partners:
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
     
  0.955
PGSC0003DMT400046614
Structure-specific recognition protein (639 aa)
     
  0.952
PGSC0003DMT400003579
Structure-specific recognition protein (639 aa)
     
  0.952
PGSC0003DMT400065320
DNA repair protein RAD51 homolog 2 (69 aa)
   
 
  0.867
PGSC0003DMT400065314
DNA repair protein RAD51 homolog 2 (219 aa)
   
 
  0.867
PGSC0003DMT400060032
DNA repair protein recA homolog 3, mitochondrial (461 aa)
   
 
  0.867
PGSC0003DMT400056917
Replicase (419 aa)
   
 
  0.867
PGSC0003DMT400021038
RecA protein (361 aa)
   
 
  0.867
PGSC0003DMT400071679
DNA helicase (208 aa)
   
 
  0.843
PGSC0003DMT400065388
Conserved gene of unknown function (477 aa)
   
 
  0.843
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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