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PGSC0003DMT400068281 PGSC0003DMT400068281 PGSC0003DMT400044280 PGSC0003DMT400044280 PGSC0003DMT400057595 PGSC0003DMT400057595 PGSC0003DMT400075431 PGSC0003DMT400075431 PGSC0003DMT400006885 PGSC0003DMT400006885 PGSC0003DMT400006808 PGSC0003DMT400006808 PGSC0003DMT400017443 PGSC0003DMT400017443 PGSC0003DMT400011768 PGSC0003DMT400011768 PGSC0003DMT400010250 PGSC0003DMT400010250 PGSC0003DMT400055176 PGSC0003DMT400055176 PGSC0003DMT400023399 PGSC0003DMT400023399
"PGSC0003DMT400017443" - Silencing group B protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400017443Silencing group B protein (188 aa)    
Predicted Functional Partners:
PGSC0003DMT400006808
NMDA receptor-regulated protein (897 aa)
     
 
  0.979
PGSC0003DMT400011768
Huntingtin interacting protein K (110 aa)
     
 
  0.911
PGSC0003DMT400010250
Conserved gene of unknown function (134 aa)
       
 
  0.910
PGSC0003DMT400055176
N-acetyl-glutamate synthase (594 aa)
   
 
  0.718
PGSC0003DMT400023399
N-acetyl-glutamate synthase (603 aa)
   
 
  0.718
PGSC0003DMT400068281
G10 (145 aa)
     
      0.660
PGSC0003DMT400006885
Protein G10 (145 aa)
     
      0.660
PGSC0003DMT400057595
Conserved gene of unknown function (580 aa)
       
      0.633
PGSC0003DMT400075431
Pre-mRNA-splicing factor (451 aa)
     
      0.630
PGSC0003DMT400044280
Pre-mRNA-splicing factor (521 aa)
     
      0.630
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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