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PGSC0003DMT400045724 PGSC0003DMT400045724 PGSC0003DMT400093504 PGSC0003DMT400093504 PGSC0003DMT400069844 PGSC0003DMT400069844 PGSC0003DMT400086573 PGSC0003DMT400086573 PGSC0003DMT400076962 PGSC0003DMT400076962 PGSC0003DMT400017673 PGSC0003DMT400017673 PGSC0003DMT400076628 PGSC0003DMT400076628 PGSC0003DMT400038659 PGSC0003DMT400038659 PGSC0003DMT400057089 PGSC0003DMT400057089 PGSC0003DMT400062723 PGSC0003DMT400062723 PGSC0003DMT400054507 PGSC0003DMT400054507
"PGSC0003DMT400017673" - Metal ion transporter in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400017673Metal ion transporter (595 aa)    
Predicted Functional Partners:
PGSC0003DMT400093504
ZIP transporter (120 aa)
     
 
  0.770
PGSC0003DMT400086573
ZIP transporter (216 aa)
     
 
  0.770
PGSC0003DMT400076962
ZIP family metal transporter (407 aa)
     
 
  0.770
PGSC0003DMT400076628
Zinc ion binding protein (446 aa)
     
 
  0.770
PGSC0003DMT400069844
ZIP transporter (328 aa)
     
 
  0.770
PGSC0003DMT400062723
ZIP transporter (133 aa)
     
 
  0.770
PGSC0003DMT400057089
Zinc transporter (349 aa)
     
 
  0.770
PGSC0003DMT400054507
Iron transporter protein IRT1 (360 aa)
     
 
  0.770
PGSC0003DMT400045724
Zinc/iron transporter (354 aa)
     
 
  0.770
PGSC0003DMT400038659
Zinc/iron transporter (348 aa)
     
 
  0.770
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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