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PGSC0003DMT400021697 PGSC0003DMT400021697 PGSC0003DMT400065320 PGSC0003DMT400065320 PGSC0003DMT400065314 PGSC0003DMT400065314 PGSC0003DMT400068867 PGSC0003DMT400068867 PGSC0003DMT400078207 PGSC0003DMT400078207 PGSC0003DMT400067435 PGSC0003DMT400067435 PGSC0003DMT400060032 PGSC0003DMT400060032 PGSC0003DMT400032126 PGSC0003DMT400032126 PGSC0003DMT400017799 PGSC0003DMT400017799 PGSC0003DMT400021699 PGSC0003DMT400021699 PGSC0003DMT400010422 PGSC0003DMT400010422
"PGSC0003DMT400017799" - DNA-repair protein UVH3 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400017799DNA-repair protein UVH3 (1545 aa)    
Predicted Functional Partners:
PGSC0003DMT400078207
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.981
PGSC0003DMT400068867
Rad25/xp-B DNA repair helicase (728 aa)
   
  0.921
PGSC0003DMT400032126
Rad25/xp-B DNA repair helicase (731 aa)
   
  0.921
PGSC0003DMT400021699
Mismatch repair protein (159 aa)
   
  0.909
PGSC0003DMT400021697
Mismatch repair protein (201 aa)
   
  0.909
PGSC0003DMT400010422
Mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR) (943 aa)
   
  0.909
PGSC0003DMT400067435
DNA repair endonuclease UVH1 (953 aa)
     
  0.903
PGSC0003DMT400065320
DNA repair protein RAD51 homolog 2 (69 aa)
   
  0.893
PGSC0003DMT400065314
DNA repair protein RAD51 homolog 2 (219 aa)
   
  0.893
PGSC0003DMT400060032
DNA repair protein recA homolog 3, mitochondrial (461 aa)
   
  0.893
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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