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PGSC0003DMT400017488 PGSC0003DMT400017488 PGSC0003DMT400017962 PGSC0003DMT400017962 PGSC0003DMT400026512 PGSC0003DMT400026512 PGSC0003DMT400057279 PGSC0003DMT400057279 PGSC0003DMT400029204 PGSC0003DMT400029204 PGSC0003DMT400066521 PGSC0003DMT400066521
"PGSC0003DMT400017962" - CLC-Nt2 protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400017962CLC-Nt2 protein (784 aa)    
Predicted Functional Partners:
PGSC0003DMT400066521
Phosphoribosylformylglycinamidine synthase (914 aa)
         
  0.521
PGSC0003DMT400026512
Phosphoribosylformylglycinamidine synthase (1410 aa)
         
  0.521
PGSC0003DMT400057279
Voltage-gated clc-type chloride channel (752 aa)
     
   
  0.515
PGSC0003DMT400029204
Voltage-gated clc-type chloride channel (756 aa)
     
   
  0.515
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
         
  0.431
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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