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PGSC0003DMT400069477 PGSC0003DMT400069477 PGSC0003DMT400019867 PGSC0003DMT400019867 PGSC0003DMT400083968 PGSC0003DMT400083968 PGSC0003DMT400080501 PGSC0003DMT400080501 PGSC0003DMT400079142 PGSC0003DMT400079142 cyc07-like cyc07-like PGSC0003DMT400065689 PGSC0003DMT400065689 PGSC0003DMT400063904 PGSC0003DMT400063904 PGSC0003DMT400011736 PGSC0003DMT400011736 PGSC0003DMT400050335 PGSC0003DMT400050335 PGSC0003DMT400017986 PGSC0003DMT400017986
"PGSC0003DMT400017986" - Cytoplasmic ribosomal protein S13 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400017986Cytoplasmic ribosomal protein S13 (151 aa)    
Predicted Functional Partners:
PGSC0003DMT400011736
Ubiquitin extension protein (181 aa)
   
  0.999
PGSC0003DMT400083968
Cyc07 (261 aa)
   
  0.999
cyc07-like
Cyc07 (261 aa)
   
  0.999
PGSC0003DMT400019867
40S ribosomal protein S3a (260 aa)
   
  0.999
PGSC0003DMT400063904
40S ribosomal protein S2 (280 aa)
 
  0.999
PGSC0003DMT400080501
Ribosomal protein (152 aa)
   
  0.999
PGSC0003DMT400069477
Ribosomal protein (231 aa)
   
  0.999
PGSC0003DMT400065689
Ribosomal protein (152 aa)
   
  0.999
PGSC0003DMT400079142
40S ribosomal protein S2 (259 aa)
 
  0.999
PGSC0003DMT400050335
Ribosomal protein (239 aa)
   
  0.999
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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