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Si004835m Si004835m Si024566m Si024566m Si020979m Si020979m Si013709m Si013709m Si017803m Si017803m Si016908m Si016908m Si000051m Si000051m Si000035m Si000035m Si010167m Si010167m Si006243m Si006243m Si005034m Si005034m
"Si000035m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000035mUncharacterized protein (1516 aa)    
Predicted Functional Partners:
Si017803m
Uncharacterized protein (322 aa)
     
  0.980
Si024566m
Uncharacterized protein (850 aa)
     
  0.943
Si020979m
Uncharacterized protein (1357 aa)
     
  0.943
Si005034m
Uncharacterized protein (137 aa)
     
  0.943
Si000051m
Uncharacterized protein (1411 aa)
     
  0.943
Si016908m
Uncharacterized protein (522 aa)
     
  0.908
Si013709m
Histone deacetylase (458 aa)
     
  0.908
Si010167m
Histone deacetylase (430 aa)
     
  0.908
Si006243m
Histone deacetylase (518 aa)
     
  0.908
Si004835m
Uncharacterized protein (466 aa)
     
  0.908
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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