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Si034376m Si034376m Si022275m Si022275m Si034790m Si034790m Si002164m Si002164m Si000050m Si000050m Si024866m Si024866m Si007611m Si007611m Si031539m Si031539m Si011347m Si011347m Si014669m Si014669m Si008724m Si008724m
"Si000050m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000050mUncharacterized protein (1415 aa)    
Predicted Functional Partners:
Si031539m
Autophagy-related protein (119 aa)
       
 
  0.885
Si014669m
Autophagy-related protein (119 aa)
       
 
  0.885
Si011347m
Autophagy-related protein (121 aa)
       
 
  0.885
Si007611m
Autophagy-related protein (101 aa)
       
 
  0.885
Si008724m
Uncharacterized protein (1058 aa)
     
   
  0.481
Si034376m
Mg-protoporphyrin IX chelatase ; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (755 aa)
           
  0.468
Si022275m
Uncharacterized protein (392 aa)
     
  0.457
Si002164m
Uncharacterized protein (334 aa)
     
  0.457
Si034790m
Uncharacterized protein (600 aa)
           
  0.418
Si024866m
Uncharacterized protein (390 aa)
     
   
  0.412
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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