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Si009164m Si009164m Si024055m Si024055m Si016079m Si016079m Si000008m Si000008m Si016280m Si016280m Si020966m Si020966m Si000088m Si000088m Si028844m Si028844m Si013238m Si013238m Si013312m Si013312m Si015523m Si015523m
"Si000088m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000088mUncharacterized protein (1205 aa)    
Predicted Functional Partners:
Si000008m
Uncharacterized protein (2080 aa)
     
 
    0.674
Si024055m
Uncharacterized protein (1345 aa)
     
 
    0.591
Si020966m
Uncharacterized protein (1533 aa)
     
 
    0.591
Si016079m
Uncharacterized protein (1687 aa)
     
 
    0.591
Si009164m
Uncharacterized protein (1806 aa)
     
 
    0.591
Si028844m
Uncharacterized protein (939 aa)
     
      0.558
Si016280m
Uncharacterized protein (881 aa)
     
      0.558
Si015523m
Uncharacterized protein (187 aa)
     
      0.558
Si013312m
Uncharacterized protein (747 aa)
     
      0.558
Si013238m
Uncharacterized protein (876 aa)
     
      0.558
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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