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Si033879m Si033879m Si033890m Si033890m Si039027m Si039027m Si016091m Si016091m Si027332m Si027332m Si000099m Si000099m Si027555m Si027555m Si019474m Si019474m Si000646m Si000646m Si025844m Si025844m Si019352m Si019352m
"Si000099m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000099mUncharacterized protein (1185 aa)    
Predicted Functional Partners:
Si000646m
Uncharacterized protein (639 aa)
     
  0.927
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
     
  0.902
Si033890m
Uncharacterized protein (1480 aa)
   
  0.778
Si033879m
Uncharacterized protein (1564 aa)
   
  0.778
Si039027m
Uncharacterized protein (971 aa)
   
  0.756
Si027555m
Uncharacterized protein (1065 aa)
   
  0.756
Si027332m
Uncharacterized protein (887 aa)
   
  0.756
Si025844m
Uncharacterized protein (1122 aa)
   
  0.756
Si019474m
Uncharacterized protein (1148 aa)
   
  0.756
Si019352m
Uncharacterized protein (1299 aa)
   
  0.756
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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