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Si034338m Si034338m Si013288m Si013288m Si000137m Si000137m Si034519m Si034519m Si034389m Si034389m Si021515m Si021515m Si028874m Si028874m Si021364m Si021364m Si034149m Si034149m Si005866m Si005866m Si016399m Si016399m
"Si000137m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000137mUncharacterized protein (1073 aa)    
Predicted Functional Partners:
Si021515m
Uncharacterized protein (608 aa)
     
  0.953
Si034519m
Uncharacterized protein (686 aa)
     
  0.928
Si005866m
Uncharacterized protein (820 aa)
     
  0.919
Si021364m
Uncharacterized protein (699 aa)
     
  0.914
Si034389m
Uncharacterized protein (751 aa)
     
  0.910
Si016399m
Uncharacterized protein (763 aa)
     
  0.901
Si013288m
Uncharacterized protein (780 aa)
     
  0.896
Si028874m
Coatomer subunit gamma ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (888 aa)
     
 
  0.802
Si034149m
Coatomer subunit gamma ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (899 aa)
     
 
  0.735
Si034338m
Uncharacterized protein (771 aa)
     
 
  0.569
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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