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Si000146m Si000146m Si000220m Si000220m Si039628m Si039628m Si028792m Si028792m Si034940m Si034940m Si000142m Si000142m Si033595m Si033595m Si006025m Si006025m Si000945m Si000945m Si028689m Si028689m Si002589m Si002589m
"Si000142m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000142mUncharacterized protein (1060 aa)    
Predicted Functional Partners:
Si033595m
Uncharacterized protein (157 aa)
       
  0.828
Si006025m
Uncharacterized protein (654 aa)
     
  0.824
Si039628m
Histone H2A (359 aa)
       
  0.820
Si000945m
Uncharacterized protein (540 aa)
     
  0.817
Si028792m
Uncharacterized protein (1031 aa)
     
  0.807
Si000220m
Uncharacterized protein (929 aa)
     
  0.807
Si000146m
Uncharacterized protein (1054 aa)
     
  0.807
Si002589m
Uncharacterized protein (263 aa)
     
  0.800
Si034940m
Uncharacterized protein (565 aa)
     
  0.791
Si028689m
Uncharacterized protein (1385 aa)
     
  0.785
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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