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Si028677m Si028677m Si016274m Si016274m Si013224m Si013224m Si019646m Si019646m Si020943m Si020943m Si000006m Si000006m Si000160m Si000160m Si000645m Si000645m Si000735m Si000735m Si021600m Si021600m Si002140m Si002140m
"Si000160m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000160mUncharacterized protein (1015 aa)    
Predicted Functional Partners:
Si020943m
Uncharacterized protein (2158 aa)
     
 
  0.963
Si000006m
Uncharacterized protein (2163 aa)
     
 
  0.963
Si028677m
Uncharacterized protein (1497 aa)
     
   
  0.931
Si000735m
Uncharacterized protein (608 aa)
   
 
  0.663
Si019646m
Uncharacterized protein (922 aa)
     
   
  0.652
Si016274m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (889 aa)
     
   
  0.652
Si013224m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.652
Si002140m
Carbonate dehydratase ; Reversible hydration of carbon dioxide (336 aa)
       
  0.650
Si021600m
Malic enzyme (576 aa)
         
  0.644
Si000645m
Malic enzyme (639 aa)
         
  0.644
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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