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Si028267m Si028267m Si027301m Si027301m Si033952m Si033952m Si032575m Si032575m Si034149m Si034149m Si028874m Si028874m Si000204m Si000204m Si027728m Si027728m Si000177m Si000177m Si027989m Si027989m Si027688m Si027688m
"Si000204m" - Beta-coat protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Si000204mBeta-coat protein ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (950 aa)    
Predicted Functional Partners:
Si034149m
Coatomer subunit gamma ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (899 aa)
     
  0.998
Si028874m
Coatomer subunit gamma ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (888 aa)
     
  0.998
Si033952m
Coatomer subunit alpha ; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1219 aa)
     
  0.992
Si000177m
Uncharacterized protein (984 aa)
     
  0.992
Si032575m
Uncharacterized protein (255 aa)
     
  0.985
Si028267m
Uncharacterized protein (644 aa)
     
  0.985
Si027989m
Uncharacterized protein (340 aa)
     
  0.985
Si027728m
Uncharacterized protein (355 aa)
     
  0.985
Si027688m
Uncharacterized protein (395 aa)
     
  0.985
Si027301m
Uncharacterized protein (436 aa)
     
  0.985
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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