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Si036485m Si036485m Si040042m Si040042m Si033083m Si033083m Si040167m Si040167m Si000221m Si000221m Si035391m Si035391m Si002850m Si002850m Si000742m Si000742m Si009794m Si009794m Si029876m Si029876m Si032583m Si032583m
"Si000221m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000221mUncharacterized protein (927 aa)    
Predicted Functional Partners:
Si002850m
Uncharacterized protein (219 aa)
     
  0.891
Si000742m
Uncharacterized protein (606 aa)
     
  0.891
Si009794m
Uncharacterized protein (533 aa)
     
  0.869
Si036485m
Uncharacterized protein (340 aa)
     
 
  0.542
Si040167m
Uncharacterized protein (345 aa)
         
  0.523
Si040042m
Uncharacterized protein (424 aa)
         
  0.523
Si035391m
Uncharacterized protein (489 aa)
         
  0.523
Si033083m
Uncharacterized protein (175 aa)
   
 
  0.507
Si032583m
Uncharacterized protein (361 aa)
   
 
  0.507
Si029876m
Alpha-amylase (437 aa)
   
 
  0.507
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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