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Si038847m Si038847m Si001560m Si001560m Si029933m Si029933m PSD2 PSD2 Si026515m Si026515m PLDalpha1 PLDalpha1 Si017470m Si017470m Si016961m Si016961m Si022242m Si022242m Si006374m Si006374m Si006175m Si006175m
"PLDalpha1" - Phospholipase D in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLDalpha1Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (811 aa)    
Predicted Functional Partners:
Si029933m
Phosphatidate cytidylyltransferase (426 aa)
   
 
  0.940
Si001560m
Phosphatidate cytidylyltransferase (425 aa)
   
 
  0.940
Si017470m
Uncharacterized protein (389 aa)
         
  0.938
Si006374m
Uncharacterized protein (465 aa)
         
  0.938
Si038847m
Uncharacterized protein (433 aa)
       
  0.934
PSD2
Phosphatidylserine decarboxylase proenzyme 2 ; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine (643 aa)
       
  0.934
Si016961m
Uncharacterized protein (505 aa)
         
  0.929
Si026515m
Uncharacterized protein (374 aa)
     
  0.914
Si022242m
Uncharacterized protein (399 aa)
     
  0.914
Si006175m
Uncharacterized protein (552 aa)
     
  0.914
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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