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Si021020m Si021020m Si000348m Si000348m Si000375m Si000375m Si021235m Si021235m Si021228m Si021228m Si022925m Si022925m
"Si000375m" - Potassium transporter in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000375mPotassium transporter ; Potassium transporter (783 aa)    
Predicted Functional Partners:
Si021228m
Uncharacterized protein (822 aa)
           
  0.468
Si021020m
Uncharacterized protein (1164 aa)
           
  0.468
Si021235m
Uncharacterized protein (818 aa)
         
  0.442
Si000348m
Uncharacterized protein (803 aa)
         
  0.442
Si022925m
Uncharacterized protein (276 aa)
           
  0.410
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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