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Si033968m Si033968m Si016507m Si016507m Si034879m Si034879m Si039407m Si039407m Si000378m Si000378m Si031941m Si031941m Si032841m Si032841m Si030814m Si030814m Si031449m Si031449m Si031055m Si031055m Si014432m Si014432m
"Si000378m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000378mUncharacterized protein (782 aa)    
Predicted Functional Partners:
Si034879m
Uncharacterized protein (578 aa)
       
  0.696
Si031941m
Uncharacterized protein (304 aa)
       
  0.696
Si016507m
Uncharacterized protein (697 aa)
     
0.665
Si033968m
Phytochrome ; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1173 aa)
       
 
  0.581
Si031055m
Proteasome subunit beta type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (221 aa)
         
  0.567
Si014432m
Proteasome subunit beta type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (219 aa)
         
  0.567
Si039407m
Uncharacterized protein (247 aa)
     
 
  0.554
Si030814m
Uncharacterized protein (268 aa)
     
 
  0.554
Si032841m
Uncharacterized protein (136 aa)
         
  0.518
Si031449m
Uncharacterized protein (141 aa)
         
  0.518
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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