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Si034127m Si034127m Si019661m Si019661m Si013227m Si013227m Si000454m Si000454m Si018115m Si018115m Si021007m Si021007m Si016091m Si016091m Si000101m Si000101m Si019640m Si019640m Si016065m Si016065m Si021352m Si021352m
"Si000454m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000454mUncharacterized protein (728 aa)    
Predicted Functional Partners:
Si034127m
Uncharacterized protein (928 aa)
  0.983
Si019661m
Uncharacterized protein (323 aa)
   
  0.967
Si019640m
Uncharacterized protein (417 aa)
   
  0.967
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
   
0.946
Si013227m
Uncharacterized protein (903 aa)
     
 
  0.939
Si021007m
Structural maintenance of chromosomes protein (1243 aa)
     
 
  0.923
Si000101m
Structural maintenance of chromosomes protein (1175 aa)
     
 
  0.857
Si018115m
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
  0.826
Si016065m
DNA polymerase (2142 aa)
     
 
  0.778
Si021352m
Kinesin-like protein (709 aa)
     
   
  0.774
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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