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Si009668m Si009668m Si025817m Si025817m Si029095m Si029095m Si028077m Si028077m Si034037m Si034037m Si034039m Si034039m Si000612m Si000612m Si009166m Si009166m Si016569m Si016569m Si016238m Si016238m Si015189m Si015189m
"Si000612m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000612mUncharacterized protein (651 aa)    
Predicted Functional Partners:
Si028077m
Uncharacterized protein (130 aa)
     
  0.884
Si025817m
Clathrin heavy chain ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1710 aa)
     
  0.884
Si009166m
Clathrin heavy chain ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1710 aa)
     
  0.884
Si034037m
Uncharacterized protein (1044 aa)
     
  0.853
Si034039m
Uncharacterized protein (1043 aa)
     
  0.852
Si029095m
Uncharacterized protein (699 aa)
     
  0.741
Si016569m
Uncharacterized protein (670 aa)
     
  0.741
Si016238m
Uncharacterized protein (942 aa)
     
  0.728
Si015189m
Uncharacterized protein (329 aa)
     
  0.728
Si009668m
Uncharacterized protein (593 aa)
     
  0.728
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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