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Si006227m Si006227m Si000644m Si000644m CDPK1 CDPK1 Si036283m Si036283m Si001708m Si001708m Si036531m Si036531m Si036015m Si036015m Si024914m Si024914m Si036309m Si036309m
"Si000644m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000644mUncharacterized protein (640 aa)    
Predicted Functional Partners:
Si036531m
Uncharacterized protein (333 aa)
       
 
  0.760
Si036309m
Uncharacterized protein (362 aa)
       
 
  0.760
Si036283m
Uncharacterized protein (366 aa)
       
 
  0.760
CDPK1
Calcium-dependent protein kinase 2 (531 aa)
       
 
  0.494
Si006227m
Uncharacterized protein (529 aa)
           
  0.408
Si036015m
Uncharacterized protein (397 aa)
       
 
  0.406
Si024914m
Uncharacterized protein (436 aa)
       
 
  0.406
Si001708m
Uncharacterized protein (401 aa)
       
 
  0.406
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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