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Si017644m Si017644m Si033886m Si033886m Si037150m Si037150m Si037216m Si037216m Si029855m Si029855m Si033906m Si033906m Si039134m Si039134m Si018515m Si018515m Si000648m Si000648m Si000027m Si000027m Si033853m Si033853m
"Si000648m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000648mUncharacterized protein (637 aa)    
Predicted Functional Partners:
Si029855m
Histone acetyltransferase (441 aa)
     
  0.930
Si018515m
Uncharacterized protein (169 aa)
       
  0.807
Si037216m
PHD finger protein ING (243 aa)
     
  0.636
Si037150m
PHD finger protein ING (252 aa)
     
  0.636
Si039134m
Uncharacterized protein (1593 aa)
     
 
  0.615
Si033906m
Uncharacterized protein (1386 aa)
     
 
  0.615
Si033853m
Uncharacterized protein (1933 aa)
     
 
  0.615
Si000027m
Uncharacterized protein (1623 aa)
     
 
  0.615
Si017644m
Uncharacterized protein (353 aa)
     
  0.538
Si033886m
Uncharacterized protein (1507 aa)
     
  0.511
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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