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Si034071m Si034071m Si021122m Si021122m Si021067m Si021067m Si000263m Si000263m Si028835m Si028835m Si013188m Si013188m Si016070m Si016070m Si000711m Si000711m Si018574m Si018574m Si034778m Si034778m Si016776m Si016776m
"Si000711m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000711mUncharacterized protein (616 aa)    
Predicted Functional Partners:
Si034778m
Uncharacterized protein (602 aa)
     
      0.882
Si016070m
Uncharacterized protein (1907 aa)
     
      0.845
Si013188m
Uncharacterized protein (994 aa)
       
      0.835
Si028835m
Uncharacterized protein (957 aa)
       
      0.820
Si000263m
Uncharacterized protein (874 aa)
       
      0.820
Si021067m
Uncharacterized protein (1034 aa)
       
      0.562
Si034071m
Uncharacterized protein (997 aa)
     
      0.552
Si021122m
Uncharacterized protein (936 aa)
     
      0.552
Si016776m
Uncharacterized protein (571 aa)
           
  0.525
Si018574m
Histone H2B ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (154 aa)
           
  0.418
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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