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Si021917m Si021917m Si006427m Si006427m Si030636m Si030636m Si035477m Si035477m Si013613m Si013613m Si029698m Si029698m Si000789m Si000789m Si022050m Si022050m Si001253m Si001253m Si006583m Si006583m Si017403m Si017403m
"Si000789m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000789mUncharacterized protein (587 aa)    
Predicted Functional Partners:
Si035477m
Uncharacterized protein (477 aa)
   
 
  0.971
Si029698m
Uncharacterized protein (478 aa)
   
 
  0.971
Si022050m
Uncharacterized protein (445 aa)
   
 
  0.971
Si006427m
Uncharacterized protein (446 aa)
   
 
  0.971
Si021917m
Phosphoglycerate kinase (480 aa)
   
 
  0.970
Si017403m
Phosphoglycerate kinase (402 aa)
   
 
  0.970
Si006583m
Phosphoglycerate kinase (401 aa)
   
 
  0.970
Si001253m
Phosphoglycerate kinase (482 aa)
   
 
  0.970
Si013613m
Uncharacterized protein (498 aa)
         
  0.933
Si030636m
Uncharacterized protein (304 aa)
   
 
  0.930
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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