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Si036520m Si036520m Si028378m Si028378m Si001292m Si001292m Si025912m Si025912m Si000814m Si000814m Si025935m Si025935m Si028294m Si028294m Si000606m Si000606m Si010177m Si010177m Si004808m Si004808m Si005758m Si005758m
"Si000814m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000814mUncharacterized protein (578 aa)    
Predicted Functional Partners:
Si036520m
Uncharacterized protein (335 aa)
       
  0.881
Si001292m
Uncharacterized protein (473 aa)
       
  0.881
Si010177m
Uncharacterized protein (427 aa)
       
  0.839
Si004808m
Uncharacterized protein (360 aa)
     
  0.833
Si005758m
Non-specific serine/threonine protein kinase (1039 aa)
   
  0.824
Si000606m
Uncharacterized protein (653 aa)
   
  0.824
Si028378m
Uncharacterized protein (973 aa)
   
  0.822
Si028294m
Uncharacterized protein (952 aa)
   
  0.822
Si025935m
Uncharacterized protein (924 aa)
   
  0.822
Si025912m
Uncharacterized protein (970 aa)
   
  0.822
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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