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Si016129m Si016129m Si034247m Si034247m Si013248m Si013248m Si006010m Si006010m Si034681m Si034681m Si034692m Si034692m Si021231m Si021231m Si013699m Si013699m Si009351m Si009351m Si004404m Si004404m Si000841m Si000841m
"Si000841m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si000841mUncharacterized protein (569 aa)    
Predicted Functional Partners:
Si034692m
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (626 aa)
     
 
  0.979
Si016129m
Uncharacterized protein (1222 aa)
   
  0.964
Si009351m
Uncharacterized protein (838 aa)
     
        0.962
Si021231m
2’-O-ribose RNA methyltransferase SPB1 homolog ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (822 aa)
     
 
  0.926
Si034681m
Uncharacterized protein (629 aa)
   
 
0.922
Si013248m
Uncharacterized protein (859 aa)
   
 
0.913
Si034247m
Uncharacterized protein (842 aa)
     
      0.912
Si013699m
Uncharacterized protein (463 aa)
     
 
  0.912
Si006010m
Nucleolar GTP-binding protein 1 ; Involved in the biogenesis of the 60S ribosomal subunit (667 aa)
     
 
  0.912
Si004404m
Uncharacterized protein (637 aa)
     
 
  0.912
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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