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Si002331m Si002331m Si024931m Si024931m Si034957m Si034957m Si001296m Si001296m Si001065m Si001065m Si034298m Si034298m Si016336m Si016336m Si037024m Si037024m Si034117m Si034117m Si021996m Si021996m Si016091m Si016091m
"Si001065m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001065mUncharacterized protein (515 aa)    
Predicted Functional Partners:
Si001296m
Uncharacterized protein (472 aa)
   
   
  0.696
Si021996m
Uncharacterized protein (459 aa)
   
 
  0.688
Si034298m
Uncharacterized protein (807 aa)
   
   
  0.599
Si016336m
Uncharacterized protein (805 aa)
   
   
  0.599
Si034957m
Uncharacterized protein (561 aa)
   
        0.577
Si024931m
Uncharacterized protein (320 aa)
   
        0.577
Si002331m
Uncharacterized protein (311 aa)
   
        0.577
Si037024m
Uncharacterized protein (270 aa)
     
 
  0.552
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
   
 
  0.548
Si034117m
Uncharacterized protein (937 aa)
   
    0.546
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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