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Si020876m Si020876m Si009201m Si009201m Si021092m Si021092m Si020956m Si020956m Si013128m Si013128m Si021349m Si021349m Si033950m Si033950m Si019303m Si019303m Si001071m Si001071m Si020222m Si020222m Si008697m Si008697m
"Si001071m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001071mUncharacterized protein (515 aa)    
Predicted Functional Partners:
Si020956m
Uncharacterized protein (1653 aa)
     
 
  0.987
Si021092m
Elongation factor Ts ; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (988 aa)
     
 
  0.942
Si033950m
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1226 aa)
     
      0.818
Si020876m
Uncharacterized protein (876 aa)
     
      0.818
Si013128m
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1257 aa)
     
      0.818
Si009201m
DNA-directed RNA polymerase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1234 aa)
     
      0.818
Si020222m
Uncharacterized protein (1600 aa)
     
      0.808
Si019303m
Uncharacterized protein (381 aa)
     
      0.808
Si008697m
Uncharacterized protein (1908 aa)
     
      0.808
Si021349m
Uncharacterized protein (711 aa)
     
  0.806
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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