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Si034151m Si034151m Si032841m Si032841m Si001104m Si001104m Si020943m Si020943m Si031449m Si031449m Si016272m Si016272m Si000006m Si000006m Si013224m Si013224m Si028677m Si028677m Si019646m Si019646m Si016274m Si016274m
"Si001104m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001104mUncharacterized protein (509 aa)    
Predicted Functional Partners:
Si020943m
Uncharacterized protein (2158 aa)
       
 
  0.755
Si000006m
Uncharacterized protein (2163 aa)
       
 
  0.755
Si028677m
Uncharacterized protein (1497 aa)
       
 
  0.642
Si016272m
Uncharacterized protein (890 aa)
     
 
  0.554
Si032841m
Uncharacterized protein (136 aa)
       
    0.547
Si031449m
Uncharacterized protein (141 aa)
       
    0.547
Si019646m
Uncharacterized protein (922 aa)
           
  0.489
Si016274m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (889 aa)
           
  0.489
Si013224m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
           
  0.489
Si034151m
Beta-adaptin-like protein ; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (898 aa)
       
    0.459
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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