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Si026147m Si026147m Si019257m Si019257m Si007467m Si007467m Si034718m Si034718m Si011422m Si011422m Si001166m Si001166m Si007605m Si007605m Si018593m Si018593m Si011301m Si011301m Si011236m Si011236m Si001985m Si001985m
"Si001166m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001166mUncharacterized protein (496 aa)    
Predicted Functional Partners:
Si011301m
Uncharacterized protein (131 aa)
       
  0.979
Si026147m
Signal recognition particle subunit SRP68 ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (592 aa)
     
  0.965
Si007467m
Uncharacterized protein (140 aa)
     
  0.964
Si019257m
Uncharacterized protein (100 aa)
     
  0.957
Si034718m
Uncharacterized protein (621 aa)
 
0.957
Si011422m
Signal recognition particle 9 kDa protein ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding (103 aa)
     
  0.953
Si007605m
Signal recognition particle 9 kDa protein ; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding (103 aa)
     
  0.953
Si001985m
Uncharacterized protein (360 aa)
 
0.951
Si018593m
Uncharacterized protein (151 aa)
     
  0.949
Si011236m
Uncharacterized protein (152 aa)
     
  0.949
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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