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Si013520m Si013520m Si035005m Si035005m Si029271m Si029271m Si034692m Si034692m Si021267m Si021267m Si034563m Si034563m Si029128m Si029128m Si033349m Si033349m Si009391m Si009391m Si017799m Si017799m Si001182m Si001182m
"Si001182m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001182mUncharacterized protein (493 aa)    
Predicted Functional Partners:
Si013520m
Uncharacterized protein (545 aa)
     
        0.995
Si033349m
Uncharacterized protein (287 aa)
     
 
  0.993
Si034692m
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (626 aa)
     
 
  0.989
Si034563m
Uncharacterized protein (666 aa)
     
      0.982
Si009391m
Uncharacterized protein (798 aa)
     
      0.982
Si017799m
Uncharacterized protein (323 aa)
     
 
  0.970
Si035005m
Uncharacterized protein (552 aa)
     
      0.968
Si029271m
Uncharacterized protein (603 aa)
     
      0.968
Si021267m
Uncharacterized protein (790 aa)
     
      0.964
Si029128m
Ribosome biogenesis protein BOP1 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (680 aa)
     
   
  0.962
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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