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Si034793m Si034793m Si037401m Si037401m Si018850m Si018850m Si032031m Si032031m Si001309m Si001309m Si028677m Si028677m Si021576m Si021576m Si000006m Si000006m Si026148m Si026148m Si020943m Si020943m
"Si001309m" - Glycosyltransferase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001309mGlycosyltransferase (471 aa)    
Predicted Functional Partners:
Si020943m
Uncharacterized protein (2158 aa)
           
  0.468
Si000006m
Uncharacterized protein (2163 aa)
           
  0.468
Si028677m
Uncharacterized protein (1497 aa)
           
  0.445
Si037401m
Uncharacterized protein (224 aa)
         
  0.415
Si034793m
Uncharacterized protein (599 aa)
         
  0.415
Si032031m
Uncharacterized protein (461 aa)
         
  0.415
Si026148m
Uncharacterized protein (592 aa)
         
  0.415
Si021576m
Uncharacterized protein (585 aa)
         
  0.415
Si018850m
Ubiquitin-like protein ATG12 ; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (91 aa)
           
  0.414
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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