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Si010235m Si010235m Si036280m Si036280m Si026483m Si026483m Si035903m Si035903m Si022118m Si022118m Si001397m Si001397m Si036352m Si036352m Si006676m Si006676m Si017628m Si017628m Si016877m Si016877m Si016715m Si016715m
"Si001397m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001397mUncharacterized protein (454 aa)    
Predicted Functional Partners:
Si016877m
Uncharacterized protein (529 aa)
       
  0.926
Si016715m
Uncharacterized protein (593 aa)
         
  0.900
Si036352m
Glutamine synthetase (357 aa)
         
    0.900
Si036280m
Glutamine synthetase (367 aa)
         
    0.900
Si035903m
Glutamate dehydrogenase (411 aa)
         
    0.900
Si026483m
Uncharacterized protein (388 aa)
         
    0.900
Si022118m
Glutamine synthetase (428 aa)
         
    0.900
Si017628m
Glutamine synthetase (356 aa)
         
    0.900
Si010235m
Glutamate dehydrogenase (411 aa)
         
    0.900
Si006676m
Uncharacterized protein (376 aa)
         
    0.900
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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