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Si034247m Si034247m Si029885m Si029885m Si010975m Si010975m Si034692m Si034692m Si026908m Si026908m Si009319m Si009319m Si022231m Si022231m Si035065m Si035065m Si001554m Si001554m Si022093m Si022093m Si021463m Si021463m
"Si001554m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001554mUncharacterized protein (426 aa)    
Predicted Functional Partners:
Si009319m
Uncharacterized protein (895 aa)
     
  0.991
Si034692m
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (626 aa)
     
  0.977
Si022231m
Uncharacterized protein (401 aa)
     
 
  0.957
Si022093m
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (435 aa)
   
 
  0.950
Si029885m
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (435 aa)
   
 
  0.950
Si026908m
Uncharacterized protein (183 aa)
     
    0.949
Si010975m
Uncharacterized protein (231 aa)
     
    0.949
Si021463m
Uncharacterized protein (629 aa)
 
0.946
Si035065m
Uncharacterized protein (541 aa)
     
 
  0.943
Si034247m
Uncharacterized protein (842 aa)
     
 
  0.934
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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