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Si005242m Si005242m Si022850m Si022850m Si022814m Si022814m Si030719m Si030719m Si001596m Si001596m Si033890m Si033890m Si002132m Si002132m Si036592m Si036592m Si017691m Si017691m Si022239m Si022239m Si010565m Si010565m
"Si001596m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001596mUncharacterized protein (420 aa)    
Predicted Functional Partners:
Si022850m
Uncharacterized protein (291 aa)
 
     
  0.854
Si017691m
Uncharacterized protein (345 aa)
 
     
  0.848
Si022239m
Uncharacterized protein (399 aa)
 
   
  0.847
Si002132m
Uncharacterized protein (337 aa)
 
     
  0.829
Si030719m
Uncharacterized protein (285 aa)
 
     
  0.817
Si036592m
Uncharacterized protein (328 aa)
 
     
  0.815
Si010565m
Uncharacterized protein (332 aa)
 
     
  0.815
Si005242m
Uncharacterized protein (58 aa)
       
  0.766
Si022814m
Uncharacterized protein (297 aa)
 
   
  0.761
Si033890m
Uncharacterized protein (1480 aa)
       
  0.532
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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