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Si001011m Si001011m Si026132m Si026132m Si035263m Si035263m Si035237m Si035237m Si035539m Si035539m Si000068m Si000068m Si029700m Si029700m Si000781m Si000781m Si013768m Si013768m Si021684m Si021684m Si001641m Si001641m
"Si001641m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001641mUncharacterized protein (412 aa)    
Predicted Functional Partners:
Si000068m
Uncharacterized protein (1290 aa)
         
  0.968
Si035237m
Serine hydroxymethyltransferase ; Interconversion of serine and glycine (513 aa)
         
  0.920
Si026132m
Serine hydroxymethyltransferase ; Interconversion of serine and glycine (602 aa)
         
  0.920
Si021684m
Serine hydroxymethyltransferase ; Interconversion of serine and glycine (543 aa)
         
  0.920
Si001011m
Serine hydroxymethyltransferase ; Interconversion of serine and glycine (523 aa)
         
  0.920
Si000781m
Uncharacterized protein (591 aa)
         
  0.920
Si029700m
Uncharacterized protein (478 aa)
   
 
  0.907
Si013768m
Uncharacterized protein (437 aa)
     
 
  0.905
Si035539m
Uncharacterized protein (466 aa)
   
 
  0.903
Si035263m
Uncharacterized protein (510 aa)
   
 
  0.903
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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