Full Link:
STRINGSTRING
Si025283m Si025283m Si030280m Si030280m Si021092m Si021092m Si001649m Si001649m Si013520m Si013520m Si033064m Si033064m Si018220m Si018220m Si017691m Si017691m Si000606m Si000606m Si017563m Si017563m Si017602m Si017602m
"Si001649m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001649mUncharacterized protein (410 aa)    
Predicted Functional Partners:
Si000606m
Uncharacterized protein (653 aa)
         
  0.646
Si025283m
Uncharacterized protein (476 aa)
 
   
  0.512
Si013520m
Uncharacterized protein (545 aa)
   
   
  0.502
Si021092m
Elongation factor Ts ; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (988 aa)
   
        0.495
Si033064m
rRNA adenine N(6)-methyltransferase (368 aa)
   
   
  0.487
Si030280m
rRNA adenine N(6)-methyltransferase (360 aa)
   
   
  0.487
Si018220m
rRNA adenine N(6)-methyltransferase (241 aa)
   
   
  0.487
Si017602m
rRNA adenine N(6)-methyltransferase (359 aa)
   
   
  0.487
Si017563m
rRNA adenine N(6)-methyltransferase (368 aa)
   
   
  0.487
Si017691m
Uncharacterized protein (345 aa)
              0.459
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (2%)