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Si022717m Si022717m Si016781m Si016781m Si025328m Si025328m Si001674m Si001674m Si016091m Si016091m Si018416m Si018416m Si006248m Si006248m Si005851m Si005851m
"Si001674m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001674mUncharacterized protein (406 aa)    
Predicted Functional Partners:
Si022717m
Uncharacterized protein (314 aa)
         
  0.928
Si016781m
Uncharacterized protein (569 aa)
         
  0.928
Si025328m
Uncharacterized protein (413 aa)
   
   
 
0.801
Si006248m
Uncharacterized protein (517 aa)
         
 
0.800
Si018416m
Uncharacterized protein (192 aa)
       
      0.541
Si005851m
Urea amidohydrolase (841 aa)
           
  0.477
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
           
  0.429
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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