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Si011287m Si011287m Si037987m Si037987m Si019233m Si019233m Si034517m Si034517m Si031291m Si031291m SIGT SIGT Si026876m Si026876m Si010964m Si010964m Si016097m Si016097m Si019126m Si019126m Si014668m Si014668m
"SIGT" - Signal transducer/two-component sensor protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIGTSignal transducer/two-component sensor protein (405 aa)    
Predicted Functional Partners:
Si037987m
Uncharacterized protein (134 aa)
     
 
  0.762
Si034517m
Uncharacterized protein (687 aa)
     
 
  0.762
Si031291m
Uncharacterized protein (172 aa)
     
 
  0.762
Si026876m
Uncharacterized protein (199 aa)
     
 
  0.762
Si019233m
Uncharacterized protein (123 aa)
     
 
  0.762
Si014668m
Uncharacterized protein (121 aa)
     
 
  0.762
Si011287m
Uncharacterized protein (135 aa)
     
 
  0.762
Si010964m
Uncharacterized protein (234 aa)
     
 
  0.762
Si019126m
Uncharacterized protein (1247 aa)
       
      0.534
Si016097m
Uncharacterized protein (1416 aa)
       
      0.534
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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