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Si010500m Si010500m Si020134m Si020134m Si005186m Si005186m Si019891m Si019891m Si029729m Si029729m Si019109m Si019109m Si001727m Si001727m Si019904m Si019904m Si011762m Si011762m Si016954m Si016954m Si010526m Si010526m
"Si001727m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001727mUncharacterized protein (400 aa)    
Predicted Functional Partners:
Si029729m
Glycosyltransferase (471 aa)
           
  0.468
Si019904m
Uncharacterized protein (519 aa)
           
  0.468
Si019891m
Uncharacterized protein (511 aa)
           
  0.468
Si019109m
Uncharacterized protein (380 aa)
           
  0.468
Si011762m
Uncharacterized protein (339 aa)
           
  0.468
Si010526m
Uncharacterized protein (341 aa)
           
  0.468
Si010500m
Uncharacterized protein (345 aa)
           
  0.468
Si005186m
Uncharacterized protein (372 aa)
           
  0.461
Si020134m
Uncharacterized protein (511 aa)
           
  0.457
Si016954m
Uncharacterized protein (507 aa)
           
  0.457
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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