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STRINGSTRING
Si039857m Si039857m Si013224m Si013224m Si019646m Si019646m Si039456m Si039456m Si016274m Si016274m Si001735m Si001735m Si033886m Si033886m Si020193m Si020193m Si038895m Si038895m Si000062m Si000062m Si016095m Si016095m
"Si001735m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001735mUncharacterized protein (399 aa)    
Predicted Functional Partners:
Si019646m
Uncharacterized protein (922 aa)
           
  0.725
Si016274m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (889 aa)
           
  0.725
Si013224m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
           
  0.725
Si033886m
Uncharacterized protein (1507 aa)
       
  0.700
Si000062m
Uncharacterized protein (1339 aa)
       
  0.700
Si016095m
Uncharacterized protein (1445 aa)
     
  0.683
Si020193m
Uncharacterized protein (865 aa)
       
  0.663
Si039857m
Uncharacterized protein (408 aa)
       
  0.648
Si039456m
Uncharacterized protein (405 aa)
       
  0.648
Si038895m
Uncharacterized protein (142 aa)
       
  0.648
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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