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Si029022m Si029022m Si030150m Si030150m Si009451m Si009451m Si024481m Si024481m Si028054m Si028054m Si005840m Si005840m Si001800m Si001800m Si022672m Si022672m Si011222m Si011222m Si022338m Si022338m
"Si001800m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001800mUncharacterized protein (388 aa)    
Predicted Functional Partners:
Si030150m
Uncharacterized protein (382 aa)
           
  0.552
Si022338m
Uncharacterized protein (382 aa)
           
  0.552
Si005840m
Uncharacterized protein (861 aa)
           
  0.493
Si024481m
Uncharacterized protein (152 aa)
           
  0.468
Si011222m
Uncharacterized protein (157 aa)
           
  0.468
Si022672m
Uncharacterized protein (322 aa)
           
  0.467
Si029022m
Uncharacterized protein (756 aa)
           
  0.408
Si028054m
Uncharacterized protein (747 aa)
           
  0.408
Si009451m
Uncharacterized protein (748 aa)
           
  0.408
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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