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Si005991m Si005991m Si036695m Si036695m Si035794m Si035794m Si037045m Si037045m Si025305m Si025305m Si034525m Si034525m Si023461m Si023461m Si001804m Si001804m Si001277m Si001277m Si016508m Si016508m Si016509m Si016509m
"Si001804m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001804mUncharacterized protein (387 aa)    
Predicted Functional Partners:
Si034525m
Auxin response factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (684 aa)
           
  0.459
Si025305m
Uncharacterized protein (562 aa)
           
  0.459
Si016509m
Auxin response factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (696 aa)
           
  0.459
Si016508m
Uncharacterized protein (697 aa)
           
  0.459
Si005991m
Auxin response factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (686 aa)
           
  0.459
Si001277m
Uncharacterized protein (476 aa)
           
  0.459
Si037045m
Uncharacterized protein (266 aa)
           
  0.457
Si036695m
Uncharacterized protein (316 aa)
           
  0.457
Si035794m
Uncharacterized protein (432 aa)
           
  0.457
Si023461m
Annotation not available (169 aa)
           
  0.457
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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