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Si032556m Si032556m Si029128m Si029128m Si000751m Si000751m Si001814m Si001814m Si009319m Si009319m Si022093m Si022093m Si028833m Si028833m Si001554m Si001554m Si029885m Si029885m Si017435m Si017435m Si017440m Si017440m
"Si001814m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001814mUncharacterized protein (386 aa)    
Predicted Functional Partners:
Si000751m
Uncharacterized protein (601 aa)
     
  0.982
Si009319m
Uncharacterized protein (895 aa)
     
  0.863
Si001554m
Uncharacterized protein (426 aa)
     
  0.705
Si032556m
Uncharacterized protein (426 aa)
       
    0.668
Si029885m
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (435 aa)
     
  0.606
Si022093m
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (435 aa)
     
  0.606
Si017440m
Uncharacterized protein (396 aa)
     
 
  0.601
Si017435m
Uncharacterized protein (396 aa)
     
 
  0.601
Si028833m
Uncharacterized protein (961 aa)
     
 
  0.512
Si029128m
Ribosome biogenesis protein BOP1 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (680 aa)
     
 
  0.505
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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