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Si001296m Si001296m Si021996m Si021996m Si034298m Si034298m Si035365m Si035365m Si017189m Si017189m Si016336m Si016336m Si021257m Si021257m Si001932m Si001932m Si013913m Si013913m Si000357m Si000357m Si016471m Si016471m
"Si001932m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001932mUncharacterized protein (367 aa)    
Predicted Functional Partners:
Si035365m
Tyrosyl-tRNA synthetase (494 aa)
     
  0.872
Si034298m
Uncharacterized protein (807 aa)
   
 
  0.854
Si016336m
Uncharacterized protein (805 aa)
   
 
  0.854
Si021996m
Uncharacterized protein (459 aa)
   
   
  0.815
Si017189m
Uncharacterized protein (449 aa)
   
   
 
0.805
Si013913m
Uncharacterized protein (385 aa)
   
   
 
0.805
Si021257m
Uncharacterized protein (797 aa)
   
   
  0.783
Si000357m
Uncharacterized protein (796 aa)
   
   
  0.783
Si001296m
Uncharacterized protein (472 aa)
   
   
  0.726
Si016471m
Uncharacterized protein (717 aa)
   
   
  0.715
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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