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Si014900m Si014900m Si017253m Si017253m Si026639m Si026639m Si032845m Si032845m Si035174m Si035174m Si030289m Si030289m Si030293m Si030293m Si001958m Si001958m Si030007m Si030007m Si026536m Si026536m Si026523m Si026523m
"Si001958m" - Peroxidase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001958mPeroxidase (362 aa)    
Predicted Functional Partners:
Si035174m
Uncharacterized protein (523 aa)
         
    0.900
Si032845m
Uncharacterized protein (430 aa)
         
    0.900
Si030293m
Uncharacterized protein (357 aa)
         
    0.900
Si030289m
Uncharacterized protein (357 aa)
         
    0.900
Si030007m
Uncharacterized protein (410 aa)
         
    0.900
Si026639m
Uncharacterized protein (323 aa)
         
    0.900
Si026536m
Uncharacterized protein (365 aa)
         
    0.900
Si026523m
Uncharacterized protein (369 aa)
         
    0.900
Si017253m
Uncharacterized protein (432 aa)
         
    0.900
Si014900m
Uncharacterized protein (401 aa)
         
    0.900
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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