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STRINGSTRING
Si038716m Si038716m Si009750m Si009750m Si021921m Si021921m Si001166m Si001166m Si037458m Si037458m Si014461m Si014461m Si037416m Si037416m Si001985m Si001985m Si037126m Si037126m Si014312m Si014312m Si009778m Si009778m
"Si001985m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001985mUncharacterized protein (360 aa)    
Predicted Functional Partners:
Si009778m
Uncharacterized protein (538 aa)
 
0.972
Si009750m
Uncharacterized protein (555 aa)
 
0.971
Si038716m
Uncharacterized protein (478 aa)
 
0.951
Si021921m
Uncharacterized protein (479 aa)
 
0.951
Si001166m
Uncharacterized protein (496 aa)
 
0.951
Si037458m
Uncharacterized protein (216 aa)
   
  0.923
Si014461m
Uncharacterized protein (209 aa)
   
  0.923
Si037126m
Uncharacterized protein (256 aa)
   
  0.919
Si014312m
Uncharacterized protein (256 aa)
   
  0.919
Si037416m
Uncharacterized protein (222 aa)
   
    0.917
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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