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Si002725m Si002725m Si037781m Si037781m Si034855m Si034855m Si001996m Si001996m Si034916m Si034916m Si029424m Si029424m Si000006m Si000006m Si020943m Si020943m Si034842m Si034842m Si034997m Si034997m Si034798m Si034798m
"Si001996m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si001996mUncharacterized protein (358 aa)    
Predicted Functional Partners:
Si037781m
Uncharacterized protein (170 aa)
 
  0.973
Si002725m
Uncharacterized protein (242 aa)
   
 
  0.718
Si020943m
Uncharacterized protein (2158 aa)
   
   
  0.520
Si000006m
Uncharacterized protein (2163 aa)
   
   
  0.520
Si034855m
Uncharacterized protein (581 aa)
              0.503
Si029424m
Thioredoxin reductase (544 aa)
     
   
  0.495
Si034997m
Uncharacterized protein (553 aa)
       
 
  0.490
Si034916m
Urishiol oxidase ; Lignin degradation and detoxification of lignin-derived products (570 aa)
       
 
  0.490
Si034842m
Uncharacterized protein (586 aa)
       
 
  0.490
Si034798m
Uncharacterized protein (595 aa)
       
 
  0.490
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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