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Si021091m Si021091m Si016066m Si016066m Si028000m Si028000m Si025834m Si025834m Si002037m Si002037m Si034500m Si034500m Si013247m Si013247m Si035096m Si035096m Si020888m Si020888m Si020889m Si020889m rpoC1 rpoC1
"Si002037m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002037mUncharacterized protein (352 aa)    
Predicted Functional Partners:
Si025834m
Uncharacterized protein (1167 aa)
     
  0.844
Si021091m
Uncharacterized protein (988 aa)
     
  0.844
Si035096m
Uncharacterized protein (534 aa)
     
  0.780
Si034500m
Transcription initiation factor IIF alpha subunit (692 aa)
     
  0.780
Si028000m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1843 aa)
       
  0.677
Si020889m
Uncharacterized protein (1198 aa)
       
  0.677
Si020888m
Uncharacterized protein (286 aa)
       
  0.677
rpoC1
RNA polymerase beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (418 aa)
       
  0.677
Si016066m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (2050 aa)
       
  0.677
Si013247m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (860 aa)
       
  0.677
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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